Sequencing Documentation - Joe Leaving 30th Nov ‘16
 

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sequencing_pipeline [2016/11/14 15:36]
jxward
sequencing_pipeline [2016/11/14 15:37] (current)
jxward
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    * This will run the job itself and redirect any stderr or stdout into ~/qsubOutput/<runName>. If it fails, check in here first.    * This will run the job itself and redirect any stderr or stdout into ~/qsubOutput/<runName>. If it fails, check in here first.
   * When finished, run:<code>qsub ~/bin/addRunToAS.sh <runName></code>   * When finished, run:<code>qsub ~/bin/addRunToAS.sh <runName></code>
 +(If you didn't use PAPnextseq.sh)
   * Check the run at [[http://gjb-www-2.cluster.lifesci.dundee.ac.uk:3126/almostSignificant/]]   * Check the run at [[http://gjb-www-2.cluster.lifesci.dundee.ac.uk:3126/almostSignificant/]]
   * If you need to delivery the files internally, run:   * If you need to delivery the files internally, run:
 
sequencing_pipeline.txt · Last modified: 2016/11/14 15:37 by jxward
 
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